Data Set: inhs

Last Modified: 2 November 1999

Modified By: Tony Morosco

* = Denotes fields that are required for CalFlora Database

Blank values in Data Entered = data not available

Original Fields sent in FileMaker Pro File:

Family#   text
Fam.      text
Genus     text
Species   text
Auth.     text
S/V/F     text
Taxon     text
Author    text
Cultivar  text
Co.       text
T/R/S     text
Lat/Long  text
Locality  text
Habitat   text
Collector text
Coll.#    text
Date      text
Det.      text
Acc. No.  text
Label?    text
State     text
calccountytext
Serial No number
Country   text
Status    text

 

 

 

Notes:

 

Cultivar is blank for all Californian records.

35 of the original 1171 records are in face from Baja California. These were deleted from ingested data, leaving 1136 records.

8 duplicate accession numbers were found and left intact. Accession number can not be used for dataset unique ID number.

Infraspecific ranks in the form of "ssp." and "var." and one "forma".

4 records were deleted from original data since they were erroreous duplicates. (see bottom for email)

conventions:
* = Denotes fields that are required for CalFlora Database
Blank values in 'Data' column = data not available
Data tables: [TableName]![FieldName]
Source data --> converted to result data by matching value in source to result in named table.

required?

CalFlora field name

Type

Data

*

seq_num

SERIAL UNIQUE,

Unique ID number across datasets

 

dataset

varchar(16),

"inhs"

 

source

varchar(255),

"Illinois Natural History Survey Herbarium Specimens"

 

source_id

varchar(32),

[inhs - specimens]![ACC__NO_] (Accession Number)

 

dset_seq_num

integer,

[inhs - specimens]![dset_seq_num] (CalFlora generated: duplicates and nulls in INHS Accession Number)

 

orig_nomen

varchar(64),

"unknown"

 

index_date

date,

"1999-11-01"

 

observ_type

varchar(32),

"undirectedsearch"

 

doc_type

varchar(16),

"specimen"

 

rslvd_taxon

varchar(128),

[taxon names]![taxon] (taken from split fields in [inhs - specimens] but "forma" folded into "f."

 

rslvd_genus

varchar(64),

[inhs - specimens]![GENUS]

 

rslvd_specif_epith

varchar(64),

iif([inhs - specimens]![S_V_F] = "forma", "f.", [inhs - specimens]![S_V_F] )

 

rslvd_species_auth

varchar(128),

[inhs - specimens]![TAXON]

 

rslvd_infra_rank

varchar(4),

IIf([inhs - specimens]![S_V_F]="forma","f.",[inhs - specimens]![S_V_F])

 

rslvd_infra_epith

varchar(64),

[inhs - specimens]![TAXON]

 

rslvd_infra_author

varchar(128),

[inhs - specimens]![AUTHOR]

 

namesoup

varchar(255),

[inhs - specimens]![FAM_] & " " & [inhs - specimens]![GENUS] & " " & [inhs - specimens]![SPECIES] & " " & [inhs - specimens]![S_V_F] & " " & [inhs - specimens]![TAXON] & " " & [taxon names]![taxon]

 

county

char(3),

[inhs - specimens]![CO_] --> [Countycodes]![FIPCode]

 

lat

real,

IIF( [cleaned LL-DD]![LAT-DD] is not null, [cleaned LL-DD]![LAT-DD],

IIF( [cleaned TRS]![lat] is not null, [cleaned TRS]![lat] , null))

 

long

real,

IIf([cleaned LL-DD]![LONG-DD] Is Not Null,[cleaned LL-DD]![LONG-DD],IIf([cleaned TRS]![long] Is Not Null,[cleaned TRS]![long],Null))

 

utm_zone

integer,

-

 

utm10_x

real,

-

 

utm10_y

real,

-

 

elevation

integer,

[Elevation-extract]![ELEV] extracted from locality field with customized perl script.

 

elev_source

varchar(16),

[Elevation-extract]![ELEV_SRC] calculated from locality field with customized perl script.

 

site_info_avail

varchar(255)

[inhs - specimens]![HABITAT]

 

plot_id

varchar(32),

-

 

plot_size

real,

-

 

observ_date

date,

[Cleaned_dates]![YYYY-MM-DD] extracted from [inhs - specimens]![DATE] with customized perl script

 

date_prec

varchar(16),

[Cleaned_dates]![DATE_PREC] calculated from [inhs - specimens]![DATE] with customized perl script

 

auth_collector

varchar(255),

Trim([inhs - specimens]![COLLECTOR] & " " & [inhs - specimens]![COLL__] )

 

collctn

varchar(255),

-

 

orig_name

varchar(255),

Trim([inhs - specimens]![GENUS] & " " & [inhs - specimens]![SPECIES] & " " & [inhs - specimens]![AUTH_] & " " & [inhs - specimens]![S_V_F] & " " & [inhs - specimens]![TAXON] & " " & [inhs - specimens]![AUTHOR] & " " & [inhs - specimens]![CULTIVAR] )

 

orig_plants

char(8),

-

 

orig_adp

char(8),

-

 

orig_location

varchar(255),

IIf(Not IsEmpty([cleaned LL-DD]![ID]),"lat= [cleaned LL-DD]![LAT-DD] , long= [cleaned LL-DD]![LONG-DD]",IIf(Not IsEmpty([cleaned TRS]![dset_seq_num]),[cleaned TRS]![cleaned trs],IIf(Not IsEmpty([inhs - specimens]![CO_]),[inhs - specimens]![CO_],Null)))

 

orig_loc_form

varchar(16),

IIF(not IsEmpty ([cleaned LL-DD]![ID]), "lldd" , IIF(not IsEmpty( [cleaned TRS]![dset_seq_num] ), "mtrs" , IIF(not IsEmpty([inhs - specimens]![CO_] ), "county" , null)))

 

orig_loc_prec

real,

-

 

orig_loc_desc

varchar(255),

[inhs - specimens]![LOCALITY]

 

orig_county

varchar(32),

[inhs - specimens]![CO_]

 

orig_habitat

varchar(255),

[inhs - specimens]![HABITAT]

 

orig_elev

integer,

[Elevation-extract]![ORIG_ELEV] extracted from locality field with customized perl script.

 

orig_elev_form

char(8),

[Elevation-extract]![ORIG UNITS] calculated from locality field with customized perl script.

 

orig_date

varchar(32),

[inhs - specimens]![DATE]

 

u_rslvd_taxon

varchar(255),

 

 

u_orig_loc_desc

varchar(255)

 

 

 

 

Date: Tue, 2 Nov 1999 11:22:34 -0800

From: "Kenneth R. Robertson" <krrobert@uiuc.edu>

To: Tony Morosco <waltony@cs.berkeley.edu>

Subject: Re: INHS herbarium records

Hi Tony,

Sorry for the problems with the info we sent you. There were some errors

in the database, which we have now corrected.

Acc# Taxon

11587 Potamogeton pectinatus

This is a duplicated record, there is only one specimen with this number in

the herbarium.

171535 Centaurea solstitialis

This is a duplicated record, there is only one specimen with this number in

the herbarium.

171537 Artemisia californica

171537 Artemisia biennis

There is no specimen of Artemisia biennis with this accession number,

somehow the specific epithet got changed when an incorrect duplicate record

was made for A. californica.

171572 Eremacarpus setigerus

This is a duplicated record, there is only one specimen with this number in

the herbarium.

 

Ken

-=-=-=-=-=-=-=-=-=-

Kenneth R. Robertson, Ph.D.

Plant Systematist

Center for Biodiversity

Illinois Natural History Survey

607 E. Peabody Drive

Champaign, IL 61820 USA

217 244-2171 (voice); 217 333-4949 (Fax)